Title IX hurting middle school boys

In some areas, like Pittsburgh, there aren't enough girls to field a basketball team for 5th and 6th graders, the solution to the problem (so that the schools stay title IX compliant) is to not allow the boys to play if the girls don't want to, all in the name of fairness. I'm all for letting girls play sports, but should we deny boys the opportunity to play sports if their female counterparts don't want to?